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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1777371_1777740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1777371 - 1777740

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

TGTTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

CTTTGGGCAACC

Flanking Amino Acid:

PEGKWSCPHCEKEGIQWEPK

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

65.2

40.8

Major BPS

0.5

59.3

39.1

Major PPT

80.9

0.7

0.8

73.4

37.1

Minor 5ss

32.8

-2

3.3

40.9

45.3

Minor BPS

38.2

-0.9

2.8

57.89

47.1

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339