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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1777908_1779645_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1777908 - 1779645

Intron Length:

1738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAGGCCAT

5'SS Class:

weak_major

3'SS Sequence:

CCCTTGCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCCTGCTGACTG

Flanking Amino Acid:

RGKRRRKKKRTEEGDGYETD

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.2

53.5

45.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

74.2

0.55

0.8

68.6

31.8

Minor 5ss

39.4

-1.2

3.4

45.9

Minor BPS

40.3

-0.8

2.1

38.83

45.2

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339