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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1779770_1781504_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1779770 - 1781504

Intron Length:

1735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTCCCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGGAC

U12 Branch Point Sequence:

AGTGCTTGGACT

Flanking Amino Acid:

IPSKRKKGSSSEEEEREESD

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

69.5

41.3

Major BPS

49.7

-0

1.4

52.4

43.3

Major PPT

82.4

0.73

0.7

76.9

25.1

Minor 5ss

39.2

-1.2

3.4

59.1

45.3

Minor BPS

54.1

0.21

1.6

70.69

40.3

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339