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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1781630_1782253_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1781630 - 1782253

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

TTCATTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

AAGTCTTTCATT

Flanking Amino Acid:

IRKAKTKEGKGPGVRKKIKG

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

68.7

37.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

84.6

0.78

0.8

37.1

Minor 5ss

32.1

-2

3.3

35.7

41.2

Minor BPS

0.3

1.7

70.96

40.7

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339