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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1783885_1787235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1783885 - 1787235

Intron Length:

3351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGCTG

5'SS Class:

major

3'SS Sequence:

CTTTCTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GTCCTCTCCACT

Flanking Amino Acid:

AAKIKRRKKEGSNDEISDNE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

64.3

47.1

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

82.1

0.72

0.8

80.8

31.3

Minor 5ss

39.9

-1.1

3.4

55.8

48.4

Minor BPS

47.4

-0.1

65.97

44.5

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339