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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1787367_1789256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1787367 - 1789256

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

CTTTTGTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

ATCCCAGTAAGT

Flanking Amino Acid:

EEADNDEDVSEEDDGVLEGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

57.2

41.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

82.4

0.73

0.8

80.6

31.4

Minor 5ss

28.1

-2.5

3.6

32.1

42.7

Minor BPS

43.6

-0.4

2.4

64.83

45.3

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339