Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_1810863_1811032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1810863 - 1811032

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGGGTAAC

5'SS Class:

major

3'SS Sequence:

CCGCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGCCAC

U12 Branch Point Sequence:

TCGTGGGTGAGC

Flanking Amino Acid:

RGASLGQPLPCSVITISGRM

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.9

0.28

1.1

61.7

38.8

Major BPS

40.8

-0.5

1.3

41.8

40.4

Major PPT

75.1

0.57

0.8

68.8

31.7

Minor 5ss

32.1

-2

3.1

45.5

42.9

Minor BPS

-1.3

2.8

44.25

44.8

Associated Gene:

Gene:

ACOT7

Ensembl Gene ID:

ENSAPLG00000015276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041748

1807874 - 1817901

10028

ENSAPLT00000026352

1807874 - 1817531

9658

ENSAPLT00000020367

1807874 - 1817323

9450