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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1810863_1811315_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1810863 - 1811315

Intron Length:
453

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGGGGG

5'SS Class:
major

3'SS Sequence:
CCGCTCTCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GAGCCAC

U12 Branch Point Sequence:
TCGTGGGTGAGC

Flanking Amino Acid:
AINFHEKIKKGSVITISGRM

Intron Amino Acid Position:
289

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.1
0.52
1.3
59.5
42.5

Major BPS
40.8
-0.5
1.3
41.8
40.4

Major PPT
75.1
0.57
0.8
68.8
31.7

Minor 5ss
24
-3
3.2
29.6
43.2

Minor BPS
33
-1.3
2.8
44.25
44.8

Associated Gene:

Gene:
ACOT7

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1807874 - 1817323
9450

1807874 - 1818130
10257