Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_1813924_1814401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1813924 - 1814401

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

ACCACGCTAACC

Flanking Amino Acid:

PVINPDRQTKEPHTVGYSQS

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

57.1

0.18

1.1

Major PPT

66.3

0.37

62.3

38.5

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

44.1

-0.4

2.3

53.94

43.7

Associated Gene:

Gene:

ACOT7

Ensembl Gene ID:

ENSAPLG00000015276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040751

1807874 - 1817323

9450

ENSAPLT00000015924

1807874 - 1818130

10257