Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_1817452_1817848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1817452 - 1817848

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGCC

5'SS Class:

major

3'SS Sequence:

GGTGCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CGGGCCGGACCC

Flanking Amino Acid:

GPGPATIQVSRIMRPDDANV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

68.8

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

0.36

0.9

58.2

38.4

Minor 5ss

-1.6

3.6

50.9

45.8

Minor BPS

37.7

-0.9

2.2

43.13

44.3

Associated Gene:

Gene:

ACOT7

Ensembl Gene ID:

ENSAPLG00000015276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041748

1807874 - 1817901

10028