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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1833692_1836154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1833692 - 1836154

Intron Length:

2463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

CTGTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCGTAA

U12 Branch Point Sequence:

CTGTGCGTAACG

Flanking Amino Acid:

MQEEEEQRRKEKEEEARLAS

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

46.9

-0.1

1.4

43.4

41.5

Major PPT

81.4

0.71

0.9

76.3

37.7

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

47.4

-0.3

2.5

58.45

49.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033894

1830298 - 1836572

6275