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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1843843_1843955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1843843 - 1843955

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TGCAGCTCACGG

Flanking Amino Acid:

KVVCRELKDPGSFLLIYLNE

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

0.28

1.1

63.1

35.8

Major PPT

67.2

0.39

0.8

59.8

29.8

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

35.2

-1.2

2.2

36.54

45.1

Associated Gene:

Gene:

PLEKHG5

Ensembl Gene ID:

ENSAPLG00000017588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034527

1841656 - 1844464

2809

ENSAPLT00000034214

1842573 - 1844464

1892