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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1850071_1850237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1850071 - 1850237

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

GCTTCCTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCGCAT

U12 Branch Point Sequence:

CCTGGCGCATCG

Flanking Amino Acid:

SGAGTGPFGREVDKMEQLES

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.3

43.4

Major BPS

44.9

-0.3

1.5

51.1

46.3

Major PPT

64.8

0.33

1.1

61.2

40.1

Minor 5ss

30.2

-2.3

3.3

31.3

42.9

Minor BPS

31.7

-1.5

2.4

34.24

46.5

Associated Gene:

Gene:

NPHP4

Ensembl Gene ID:

ENSAPLG00000002485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042045

1698774 - 1853266

154493