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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1852634_1852732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1852634 - 1852732

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGGCAC

5'SS Class:

major

3'SS Sequence:

TCATCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

AGCAGCTCATCC

Flanking Amino Acid:

KKKARRRHTDDPSKECFTLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

39.7

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

76.7

0.6

0.8

70.2

30.5

Minor 5ss

33.5

-1.9

3.4

46.4

42.4

Minor BPS

40.6

-0.7

2.1

46.57

42.1

Associated Gene:

Gene:

NPHP4

Ensembl Gene ID:

ENSAPLG00000002485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042045

1698774 - 1853266

154493