Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_1864681_1864999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1864681 - 1864999

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TTGTTCCTATTT

Flanking Amino Acid:

AIPNCVLVSQEGIEGEIPYV

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

53.4

0.18

1.9

75.86

41.4

Associated Gene:

Gene:

NOL9

Ensembl Gene ID:

ENSAPLG00000015445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029474

1864337 - 1871571

7235

ENSAPLT00000016089

1864337 - 1871571

7235