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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1866059_1866188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1866059 - 1866188

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

AGTTAATGAAAC

Flanking Amino Acid:

LPLHSFVPYQVPFNAVALRV

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

74.7

35.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

79.1

0.65

0.7

23.9

Minor 5ss

31.4

-2.1

3.2

39.6

46.4

Minor BPS

45.9

-0.3

1.9

38.4

Associated Gene:

Gene:

NOL9

Ensembl Gene ID:

ENSAPLG00000015445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016089

1864337 - 1871571

7235

ENSAPLT00000029474

1864337 - 1871571

7235