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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1871016_1871088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1871016 - 1871088

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAGC

5'SS Class:

major

3'SS Sequence:

CTCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GCTGCCTCACGC

Flanking Amino Acid:

AAVLLLAPQQALTFTGKCRL

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

63.1

43.4

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

71.6

0.49

0.7

65.2

23.5

Minor 5ss

32.9

-2

3.1

42.5

44.6

Minor BPS

42.8

-0.5

2.1

50.68

46.1

Associated Gene:

Gene:

NOL9

Ensembl Gene ID:

ENSAPLG00000015445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029474

1864337 - 1871571

7235

ENSAPLT00000016089

1864337 - 1871571

7235