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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1898412_1898865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1898412 - 1898865

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

CCTGTCTTACCA

Flanking Amino Acid:

EDQTRVKGSLKAGFFGTIVE

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

0.56

0.8

66.6

34.2

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

0.09

1.8

61.69

45.2

Associated Gene:

Gene:

DNAJC11

Ensembl Gene ID:

ENSAPLG00000015815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016534

1894590 - 1907631

13042