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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1916964_1940257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1916964 - 1940257

Intron Length:

23294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTGTATGTATCA

Flanking Amino Acid:

LLKKCWVEQKDDHGNSNGSH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

79.9

0.67

0.7

72.6

32.2

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

45.5

-0.3

2.3

63.63

43.1

Associated Gene:

Gene:

CAMTA1

Ensembl Gene ID:

ENSAPLG00000014777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042462

1916870 - 2234156

317287

ENSAPLT00000015439

1916870 - 2234125

317256