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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2001034_2041149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2001034 - 2041149

Intron Length:

40116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATTG

5'SS Class:

major

3'SS Sequence:

TTCTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TTTTCTTTATCT

Flanking Amino Acid:

EEWLTTSPKTRPQNGSMILY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

1.1

72.5

39.9

Major BPS

85.7

0.89

0.8

22.2

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

47.1

-0.3

2.9

64.8

46.5

Minor BPS

80.3

1.03

1.4

95.73

30.7

Associated Gene:

Gene:

CAMTA1

Ensembl Gene ID:

ENSAPLG00000014777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042462

1916870 - 2234156

317287

ENSAPLT00000015439

1916870 - 2234125

317256