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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2041286_2116914_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2041286 - 2116914

Intron Length:

75629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TAACCCTGTATC

Flanking Amino Acid:

HMKLKVQGVECLYGCYVHSS

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

86.1

0.81

0.7

84.9

29.9

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

48.5

-0.1

1.8

59.23

39.3

Associated Gene:

Gene:

CAMTA1

Ensembl Gene ID:

ENSAPLG00000014777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042462

1916870 - 2234156

317287

ENSAPLT00000015439

1916870 - 2234125

317256