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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2176899_2186114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2176899 - 2186114

Intron Length:

9216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

GTTCTCTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GTTCTCTTCACA

Flanking Amino Acid:

EELIGQLKPMFHGIKWTCSN

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

74.3

36.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.6

0.71

0.8

75.9

32.7

Minor 5ss

36.8

-1.5

2.9

46.6

41.8

Minor BPS

61.8

0.36

1.8

73.25

38.4

Associated Gene:

Gene:

CAMTA1

Ensembl Gene ID:

ENSAPLG00000014777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042462

1916870 - 2234156

317287

ENSAPLT00000015439

1916870 - 2234125

317256