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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2190371_2192409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2190371 - 2192409

Intron Length:

2039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TTTTTAGTAATA

Flanking Amino Acid:

DYSPEWSYPEGGVKVLITGP

Intron Amino Acid Position:

872

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

30.2

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

81.6

0.71

0.7

Minor 5ss

39.5

-1.2

2.8

48.7

47.5

Minor BPS

54.4

0.14

2.2

75.76

35.9

Associated Gene:

Gene:

CAMTA1

Ensembl Gene ID:

ENSAPLG00000014777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042462

1916870 - 2234156

317287

ENSAPLT00000015439

1916870 - 2234125

317256