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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2193639_2209594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2193639 - 2209594

Intron Length:

15956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCAACCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CTTTCTTCAACC

Flanking Amino Acid:

SSQHDWLSLDDNQFRMSILE

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.6

38.4

Major BPS

78.2

0.7

79.9

32.6

Major PPT

69.8

0.45

0.9

63.5

37.2

Minor 5ss

-1.8

2.9

40.9

39.4

Minor BPS

71.1

0.64

1.5

78.34

37.6

Associated Gene:

Gene:

CAMTA1

Ensembl Gene ID:

ENSAPLG00000014777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015439

1916870 - 2234125

317256

ENSAPLT00000042462

1916870 - 2234156

317287