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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2215895_2219660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2215895 - 2219660

Intron Length:

3766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAAG

5'SS Class:

major

3'SS Sequence:

GTTTTTCTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

GCTTTTGGAACG

Flanking Amino Acid:

IQRCYRKYKQYALYKKMTQA

Intron Amino Acid Position:

1546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.7

41.1

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

85.7

0.8

0.7

81.6

30.5

Minor 5ss

38.8

-1.3

2.8

48.4

47.4

Minor BPS

45.1

-0.5

2.1

51.88

43.1

Associated Gene:

Gene:

CAMTA1

Ensembl Gene ID:

ENSAPLG00000014777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042462

1916870 - 2234156

317287

ENSAPLT00000024124

2209595 - 2234156

24562

ENSAPLT00000015439

1916870 - 2234125

317256