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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2219855_2220047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2219855 - 2220047

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAA

U12 Branch Point Sequence:

TGTGCTTCAAAG

Flanking Amino Acid:

RAATIVQQKLRSSLLTKKQD

Intron Amino Acid Position:

1610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.3

32.5

Major BPS

60.4

0.26

1.3

65.6

41.4

Major PPT

68.2

0.41

1.1

65.8

45.3

Minor 5ss

35.1

-1.7

2.8

43.9

Minor BPS

49.3

-0.1

1.8

57.62

43.8

Associated Gene:

Gene:

CAMTA1

Ensembl Gene ID:

ENSAPLG00000014777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043182

2209595 - 2234156

24562

ENSAPLT00000042462

1916870 - 2234156

317287

ENSAPLT00000015439

1916870 - 2234125

317256