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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2220123_2234092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2220123 - 2234092

Intron Length:

13970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCAT

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

GACATGTTATGT

Flanking Amino Acid:

IMRFLRRCRHRVKELKKAKE

Intron Amino Acid Position:

1635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.1

42.9

Major BPS

72.5

0.56

1.2

63.4

Major PPT

92.9

0.97

0.7

92.3

26.6

Minor 5ss

30.7

-2.2

3.6

46.8

48.5

Minor BPS

37.9

-0.8

2.3

49.64

43.9

Associated Gene:

Gene:

CAMTA1

Ensembl Gene ID:

ENSAPLG00000014777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043182

2209595 - 2234156

24562

ENSAPLT00000042462

1916870 - 2234156

317287