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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2240254_2240886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2240254 - 2240886

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACGTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTGATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTACCTGCAGT

Flanking Amino Acid:

LQQTQHQVDEVVDIMRVNVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

78.6

35.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

67.8

0.4

62.7

38.1

Minor 5ss

41.6

-0.9

3.6

64.1

47.4

Minor BPS

49.5

0.04

2.2

77.64

44.4

Associated Gene:

Gene:

VAMP3

Ensembl Gene ID:

ENSAPLG00000012123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012615

2238762 - 2241075

2314