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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2246456_2247026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2246456 - 2247026

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCAATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAATT

Flanking Amino Acid:

YALQCVQQVQANKEFFQALN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

77.8

0.63

0.9

79.8

32.6

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

71.4

0.75

1.4

87.38

32.1

Associated Gene:

Gene:

PER3

Ensembl Gene ID:

ENSAPLG00000011254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011738

2246076 - 2260862

14787