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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2247143_2247415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2247143 - 2247415

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGGAAT

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

TCTCGTTTAACA

Flanking Amino Acid:

VASEHTPKNSDTFVAVFSLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

71.6

39.7

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

85.4

0.8

0.9

76.9

42.1

Minor 5ss

35.9

-1.6

3.3

49.4

46.6

Minor BPS

62.4

0.39

1.8

72.26

40.2

Associated Gene:

Gene:

PER3

Ensembl Gene ID:

ENSAPLG00000011254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011738

2246076 - 2260862

14787