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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2257415_2258499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2257415 - 2258499

Intron Length:

1085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GTGATTTCCATG

Flanking Amino Acid:

DVKAQAEAKCDNAPEGGGNS

Intron Amino Acid Position:

923

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

74.4

36.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

-1.4

2.8

46.6

41.8

Minor BPS

39.7

-0.9

1.8

39.96

38.5

Associated Gene:

Gene:

PER3

Ensembl Gene ID:

ENSAPLG00000011254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011738

2246076 - 2260862

14787