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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2281934_2305923_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2281934 - 2305923

Intron Length:

23990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATGAA

U12 Branch Point Sequence:

TGCCTATGAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

64.2

41.9

Major BPS

63.1

0.33

1.1

55.4

40.3

Major PPT

89.8

0.89

0.7

87.9

29.4

Minor 5ss

27.6

-2.6

34.8

41.4

Minor BPS

48.2

-0.1

1.7

58.66

39.6

Associated Gene:

Gene:

SLC45A1

Ensembl Gene ID:

ENSAPLG00000011092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043792

2261309 - 2306781

45473