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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2355627_2357972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2355627 - 2357972

Intron Length:

2346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCACC

5'SS Class:

major

3'SS Sequence:

TGCACTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ACAATATAAACT

Flanking Amino Acid:

HLAALASCIEVFKMSILKIH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

69.7

41.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

79.6

0.67

0.9

76.5

37.4

Minor 5ss

46.2

-0.4

2.6

61.9

42.5

Minor BPS

-0.2

1.9

60.72

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044568

2354769 - 2359043

4275