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Intron Name: Anas_platyrhynchos_platyrhynchos_22_23853_25878_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23853 - 25878

Intron Length:

2026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGTATA

5'SS Class:

major

3'SS Sequence:

GTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

CTGCAGTTAATA

Flanking Amino Acid:

VVYRAKDKKTDEIVALKRLK

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

80.9

32.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

89.9

0.9

0.7

84.9

29.9

Minor 5ss

35.8

-1.6

2.6

41.2

Minor BPS

46.2

-0.2

2.2

57.32

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012527

19675 - 32824

13150