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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2529937_2530679_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2529937 - 2530679

Intron Length:

743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

TCGAACTCTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AGAATTTAAACT

Flanking Amino Acid:

CDLLMYLRAARSMAAFAGMC

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

81.6

0.78

0.8

24.9

Major PPT

58.1

0.18

1.1

38.9

Minor 5ss

36.1

-1.6

2.6

Minor BPS

49.4

0.04

1.7

64.2

40.1

Associated Gene:

Gene:

RERE

Ensembl Gene ID:

ENSAPLG00000009581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009997

2460981 - 2611698

150718