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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2605336_2605455_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2605336 - 2605455

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTTCC

5'SS Class:

major

3'SS Sequence:

CATCCCGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCCAC

U12 Branch Point Sequence:

GTGCCCGGCATC

Flanking Amino Acid:

ASHPPSGLHQTSISTSAASS

Intron Amino Acid Position:

988

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

66.9

39.8

Major BPS

-0.1

1.3

55.7

39.5

Major PPT

69.6

0.44

0.9

61.8

34.4

Minor 5ss

45.9

-0.4

2.8

62.9

41.7

Minor BPS

39.1

-0.8

2.3

49.21

41.1

Associated Gene:

Gene:

RERE

Ensembl Gene ID:

ENSAPLG00000009581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009997

2460981 - 2611698

150718