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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2605650_2606214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2605650 - 2606214

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

CAGAGTTAAACT

Flanking Amino Acid:

DTPSHASQSARFYKHLDRGY

Intron Amino Acid Position:

1052

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

85.8

0.81

0.7

84.9

Minor 5ss

37.8

-1.4

3.1

48.3

47.5

Minor BPS

44.2

-0.3

56.94

45.9

Associated Gene:

Gene:

RERE

Ensembl Gene ID:

ENSAPLG00000009581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009997

2460981 - 2611698

150718