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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2610183_2610411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2610183 - 2610411

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAGCA

5'SS Class:

major

3'SS Sequence:

CTCTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGAAA

U12 Branch Point Sequence:

AGTGTTGGAAAG

Flanking Amino Acid:

EHEMLRHPVFGTPYPRDLPG

Intron Amino Acid Position:

1416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

66.6

32.2

Major BPS

50.3

0.01

1.5

61.7

43.1

Major PPT

82.1

0.72

0.8

79.8

32.2

Minor 5ss

25.4

-2.8

3.1

27.5

37.4

Minor BPS

37.6

-1

39.78

37.8

Associated Gene:

Gene:

RERE

Ensembl Gene ID:

ENSAPLG00000009581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009997

2460981 - 2611698

150718