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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2721373_2722753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2721373 - 2722753

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGCG

5'SS Class:

major

3'SS Sequence:

CCTCCGCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCGCAT

U12 Branch Point Sequence:

TCCTCCGCATCC

Flanking Amino Acid:

KDWKRSIRHKGKSLKTLMSK

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

64.1

39.3

Major BPS

57.4

0.18

1.4

67.6

40.6

Major PPT

67.7

0.4

0.9

57.8

37.6

Minor 5ss

28.1

-2.5

3.6

47.1

Minor BPS

44.2

-0.4

2.4

57.93

46.9

Associated Gene:

Gene:

SAMD11

Ensembl Gene ID:

ENSAPLG00000009193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023514

2720564 - 2835700

115137

ENSAPLT00000022447

2720405 - 2821612

101208

ENSAPLT00000042094

2720564 - 2835700

115137

ENSAPLT00000021319

2720564 - 2820824

100261

ENSAPLT00000033869

2714591 - 2820824

106234

ENSAPLT00000031120

2720405 - 2820824

100420