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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2722846_2756082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2722846 - 2756082

Intron Length:

33237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

CGCCCTGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

CCTGCTGCAACT

Flanking Amino Acid:

CPGCRISSPVNRGRLAEKRT

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

79.6

29.4

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

61.2

0.25

1.1

56.3

38.8

Minor 5ss

41.7

-0.9

3.1

53.2

Minor BPS

44.9

-0.3

2.2

62.98

47.6

Associated Gene:

Gene:

SAMD11

Ensembl Gene ID:

ENSAPLG00000009193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023514

2720564 - 2835700

115137

ENSAPLT00000022447

2720405 - 2821612

101208

ENSAPLT00000042094

2720564 - 2835700

115137

ENSAPLT00000021319

2720564 - 2820824

100261

ENSAPLT00000033869

2714591 - 2820824

106234

ENSAPLT00000031120

2720405 - 2820824

100420