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Intron Name: Anas_platyrhynchos_platyrhynchos_22_276358_277318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

276358 - 277318

Intron Length:

961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTACAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TTTTCCTGTACA

Flanking Amino Acid:

LVPLTCKRHMDSVMPSQEPQ

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

67.6

0.44

1.2

Major PPT

0.49

1.1

72.7

41.5

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

70.6

0.64

1.8

84.66

34.6

Associated Gene:

Gene:

PRKCZ

Ensembl Gene ID:

ENSAPLG00000010027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010479

249611 - 293056

43446

ENSAPLT00000040721

265744 - 292632

26889