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Intron Name: Anas_platyrhynchos_platyrhynchos_22_277921_279814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

277921 - 279814

Intron Length:

1894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATACAG

Flanking Amino Acid:

KHDSIKDDSEDIKPVIDGMD

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.9

0.85

0.8

29.9

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

47.1

-0.3

60.72

41.4

Associated Gene:

Gene:

PRKCZ

Ensembl Gene ID:

ENSAPLG00000010027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040721

265744 - 292632

26889

ENSAPLT00000010479

249611 - 293056

43446