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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2810089_2810249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2810089 - 2810249

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAC

U12 Branch Point Sequence:

GCTGAATAACCC

Flanking Amino Acid:

GVPSALCQTPGYGFLQPAQA

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

52.4

0.06

1.2

37.3

Major PPT

72.9

0.52

0.8

64.4

36.6

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

37.1

-1

2.1

44.69

43.3

Associated Gene:

Gene:

SAMD11

Ensembl Gene ID:

ENSAPLG00000009193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022447

2720405 - 2821612

101208

ENSAPLT00000031120

2720405 - 2820824

100420

ENSAPLT00000021319

2720564 - 2820824

100261

ENSAPLT00000026499

2754531 - 2820824

66294

ENSAPLT00000042094

2720564 - 2835700

115137

ENSAPLT00000009574

2749836 - 2820696

70861

ENSAPLT00000024193

2780483 - 2821612

41130

ENSAPLT00000023514

2720564 - 2835700

115137

ENSAPLT00000033869

2714591 - 2820824

106234