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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2810329_2810566_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2810329 - 2810566

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

CTTCCAGTGACC

Flanking Amino Acid:

QEMLRKQNLARLEMSAEIIR

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

74.9

0.56

0.9

69.2

31.3

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

46.9

-0.2

2.3

64.51

41.2

Associated Gene:

Gene:

SAMD11

Ensembl Gene ID:

ENSAPLG00000009193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022447

2720405 - 2821612

101208

ENSAPLT00000031120

2720405 - 2820824

100420

ENSAPLT00000021319

2720564 - 2820824

100261

ENSAPLT00000026499

2754531 - 2820824

66294

ENSAPLT00000009574

2749836 - 2820696

70861

ENSAPLT00000024193

2780483 - 2821612

41130

ENSAPLT00000042094

2720564 - 2835700

115137

ENSAPLT00000023514

2720564 - 2835700

115137

ENSAPLT00000033869

2714591 - 2820824

106234