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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2811274_2814929_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2811274 - 2814929

Intron Length:

3656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCGAACGCTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCGAAC

U12 Branch Point Sequence:

CCCCTCCGAACG

Flanking Amino Acid:

PYTMSPYFHAGTMGGLFLDG

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

48.8

-0

1.4

57.5

37.5

Major PPT

59.2

0.21

50.1

38.9

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

42.6

-0.7

1.8

41.59

Associated Gene:

Gene:

SAMD11

Ensembl Gene ID:

ENSAPLG00000009193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024193

2780483 - 2821612

41130

ENSAPLT00000022447

2720405 - 2821612

101208

ENSAPLT00000033869

2714591 - 2820824

106234

ENSAPLT00000021319

2720564 - 2820824

100261

ENSAPLT00000031120

2720405 - 2820824

100420

ENSAPLT00000009574

2749836 - 2820696

70861

ENSAPLT00000026499

2754531 - 2820824

66294