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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2815055_2818001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2815055 - 2818001

Intron Length:

2947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

CGTTTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

TGCCCCTCAGCC

Flanking Amino Acid:

NLSGCTEYTQVFREQAIDGE

Intron Amino Acid Position:

608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

78.6

0.64

0.8

73.3

31.7

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

49.6

-0

1.8

61.34

43.4

Associated Gene:

Gene:

SAMD11

Ensembl Gene ID:

ENSAPLG00000009193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021319

2720564 - 2820824

100261

ENSAPLT00000031120

2720405 - 2820824

100420

ENSAPLT00000009574

2749836 - 2820696

70861

ENSAPLT00000026499

2754531 - 2820824

66294

ENSAPLT00000024193

2780483 - 2821612

41130

ENSAPLT00000022447

2720405 - 2821612

101208

ENSAPLT00000033869

2714591 - 2820824

106234