Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_2824141_2825535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2824141 - 2825535

Intron Length:

1395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCACCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

CTCTTCCCACCC

Flanking Amino Acid:

EDLEDDGNSDEDDSTEAPRK

Intron Amino Acid Position:

751

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

78.2

37.9

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

72.4

0.51

0.8

66.2

28.7

Minor 5ss

32.5

-2

2.8

43.2

43.8

Minor BPS

43.1

-0.5

54.29

43.9

Associated Gene:

Gene:

NOC2L

Ensembl Gene ID:

ENSAPLG00000008755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040219

2823735 - 2857128

33394

ENSAPLT00000009135

2823937 - 2857128

33192