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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2827745_2830344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2827745 - 2830344

Intron Length:

2600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAAAC

5'SS Class:

major

3'SS Sequence:

GTCTTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

TTAACGTTGATT

Flanking Amino Acid:

IQLEITGKERLEDLNFPEIK

Intron Amino Acid Position:

658

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

68.8

36.3

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

83.2

0.75

0.8

76.1

37.8

Minor 5ss

-1.7

40.5

39.4

Minor BPS

54.6

0.23

2.1

76.49

40.3

Associated Gene:

Gene:

NOC2L

Ensembl Gene ID:

ENSAPLG00000008755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040219

2823735 - 2857128

33394

ENSAPLT00000009135

2823937 - 2857128

33192