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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2830459_2834613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2830459 - 2834613

Intron Length:

4155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAC

U12 Branch Point Sequence:

CCTCCCTTACAC

Flanking Amino Acid:

TFGVASRESVEQWEKQVKEE

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.5

41.3

Major BPS

60.5

0.26

1.1

70.3

34.5

Major PPT

85.2

0.79

0.7

24.1

Minor 5ss

32.5

-2

38.1

40.9

Minor BPS

51.9

0.04

1.8

60.76

44.3

Associated Gene:

Gene:

NOC2L

Ensembl Gene ID:

ENSAPLG00000008755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040219

2823735 - 2857128

33394

ENSAPLT00000009135

2823937 - 2857128

33192