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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2834758_2838592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2834758 - 2838592

Intron Length:

3835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTAT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CTTTCCTTCTTC

Flanking Amino Acid:

PELVLPTIIQLKSFLKECKI

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

84.7

28.2

Major BPS

72.3

0.55

73.3

28.9

Major PPT

73.1

0.52

0.8

64.2

Minor 5ss

38.4

-1.3

3.4

49.2

Minor BPS

44.2

-0.4

3.6

69.6

42.7

Associated Gene:

Gene:

NOC2L

Ensembl Gene ID:

ENSAPLG00000008755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040219

2823735 - 2857128

33394

ENSAPLT00000009135

2823937 - 2857128

33192